Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATGGGCTCAACTCTGCCGAGTGGTGCCGGGTA
(((((((((((...(((((...&.)))))...))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001321471
GeneSymbolTHRAP3
Binding site1173,1207
Score0.846
Seed1
Au0.412
Energy-21.0
Binding len22
Me-9.43
Phylopstem0.9427735833333332
Phylopflank2.48310244625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure