Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCCCAGCGCTGGAGCCC
....((((((...((((((((.&)))))).))....)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001321586
GeneSymbolCAMK2D
Binding site1697,1717
Score0.846
Seed0
Au0.485
Energy-22.8
Binding len20
Me-17.007
Phylopstem1.7984702222222222
Phylopflank2.93806326
Longest consecutive pairings6
Position of longest consecutive pairings14
Pairings in 3prime end7
PositionCDS
2D Structure