Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CAGAAAGGAGGTGCCAGTGT
((((((((((((((((......&)))))))))...))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001321605
GeneSymbolSCN1B
Binding site493,513
Score0.846
Seed1
Au0.338
Energy-25.5
Binding len20
Me-3.938
Phylopstem0.6203407263157894
Phylopflank2.0029791375
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end2
Position5UTR
2D Structure