Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCAGGGGAGGGAGATCACCAGTGA
(((((((((((((((..((((.&))))..)))))))))....)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001321646
GeneSymbolTRAPPC9
Binding site4449,4475
Score0.923
Seed1
Au0.324
Energy-26.3
Binding len26
Me-4.171
Phylopstem3.0798356842105257
Phylopflank3.187461581249999
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end5
Position3UTR
2D Structure