Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGAAGGGACGGGTT
.(((.(.((((((((((((...&)))))))))))).).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001321646
GeneSymbolTRAPPC9
Binding site4350,4369
Score0.923
Seed0
Au0.441
Energy-24.3
Binding len19
Me-9.456
Phylopstem4.427066691666667
Phylopflank3.64168095375
Longest consecutive pairings12
Position of longest consecutive pairings7
Pairings in 3prime end5
Position3UTR
2D Structure