Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCACAATTCCCGGCATTCGTGGGGCAGGGAGGAGTCGGC
..((((((((((((((......&.)))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001321727
GeneSymbolHTRA2
Binding site424,464
Score1.0
Seed1
Au0.324
Energy-23.3
Binding len16
Me-4.957
Phylopstem0.5288453571428573
Phylopflank0.4077957475000001
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure