Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGGGGGCAGTGCTGTTGTTGTTGTGGGGCGGGGGTCG
.((((((((((((((((((..&)))))))))..)))..................)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001321728
GeneSymbolHTRA2
Binding site940,979
Score0.846
Seed1
Au0.25
Energy-26.3
Binding len39
Me-3.793
Phylopstem0.9333185894736843
Phylopflank0.43379519750000006
Longest consecutive pairings9
Position of longest consecutive pairings30
Pairings in 3prime end6
PositionCDS
2D Structure