Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGAACTTGATAAGCCAAGAGAAGGCAGGAGCCAA
...((((((((((((((((...&)))))))).....................)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001321729
GeneSymbolEXOC6B
Binding site4382,4420
Score0.846
Seed0
Au0.515
Energy-24.9
Binding len38
Me-6.515
Phylopstem2.796173454054055
Phylopflank4.97382581125
Longest consecutive pairings8
Position of longest consecutive pairings30
Pairings in 3prime end5
Position3UTR
2D Structure