Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCACCCCCAGAACCCGGCAGCCCAGCCCCCGGTGAGGGGCCCAGTGG
((((((((((((.(((((....&.))))).)))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001321792
GeneSymbolTFPT
Binding site529,578
Score0.904
Seed1
Au0.25
Energy-29.3
Binding len21
Me-5.227
Phylopstem1.5585975384615385
Phylopflank2.3177047614999995
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end4
PositionCDS
2D Structure