Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACATTGTTTGCCCTTGGGTC
((((((((.(((((((......&))))))).))))...)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001321828
GeneSymbolNIBAN3
Binding site2123,2143
Score0.846
Seed1
Au0.544
Energy-17.5
Binding len20
Me-4.994
Phylopstem-0.25478037272727266
Phylopflank-0.20647490625
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end2
Position3UTR
2D Structure