Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&GTGGAAACGTTCTCTACTACGAAGTGATGGTGA
(((((((((((((((((....&.))))).)))))))))))).
Details
MiRNAhsa-miR-126-5p
RefseqIDNM_001321853
GeneSymbolJAK1
Binding site1398,1431
Score0.846
Seed1
Au0.515
Energy-15.5
Binding len20
Me-3.938
Phylopstem4.404348611111111
Phylopflank3.12932814875
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure