Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&GTGGAAACGTTCTCTACTACGAAGTGATGGTGA
(((((((((((((((((....&.))))).)))))))))))).
Details
MiRNAhsa-miR-126-5p
RefseqIDNM_001321854
GeneSymbolJAK1
Binding site1314,1347
Score0.846
Seed1
Au0.515
Energy-15.5
Binding len20
Me-3.938
Phylopstem1.284015188888889
Phylopflank1.9656154687499998
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure