Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACTAAGAAAGCCCAGGAGTGGCAGCCCGTCTACCCCATGAGCCAGCTGA
.((.(((((((((((((((...&.))))))))).)).)))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001321856
GeneSymbolJAK1
Binding site1802,1853
Score0.846
Seed0
Au0.412
Energy-23.9
Binding len22
Me-6.825
Phylopstem4.5328859058823525
Phylopflank4.498871119999999
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end5
PositionCDS
2D Structure