Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACTAAGAAAGCCCAGGAGTGGCAGCCCGTCTACCCCATGAGCCAGCTGA
.((.(((((((((((((((...&.))))))))).)).)))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001321857
GeneSymbolJAK1
Binding site1960,2011
Score0.923
Seed0
Au0.412
Energy-23.9
Binding len22
Me-6.825
Phylopstem4.306337506470588
Phylopflank4.8201733225
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end5
PositionCDS
2D Structure