Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCGCCATGGGGCCTTGAAGCTGGGGCTTCCCATGGGAGCTGGTA
.((((((((((...((((.((.&.)).)))).)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047427682
GeneSymbolTRPT1
Binding site164,210
Score0.923
Seed1
Au0.397
Energy-22.8
Binding len20
Me-9.286
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure