Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTGCTCAGGAAGACAGCAGAACTGCTGGTGAGCCTATGG
((..((((((((((((((((((&))))))))))))).................)))))..)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001321877
GeneSymbolHDAC9
Binding site3334,3374
Score0.923
Seed0
Au0.456
Energy-22.6
Binding len40
Me-8.527
Phylopstem3.3525361371428573
Phylopflank3.51602429
Longest consecutive pairings13
Position of longest consecutive pairings27
Pairings in 3prime end8
PositionCDS
2D Structure