Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCTGGAACCAGTGA
((((((.....((((((((((.&)))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001321895
GeneSymbolHDAC9
Binding site3903,3920
Score0.923
Seed0
Au0.662
Energy-21.5
Binding len17
Me-12.919
Phylopstem3.0863568
Phylopflank2.5019983787499993
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure