Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTTTGTTTTGTTGGAGACAGGGTCTCTGTCACCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((.((&.)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001321922
GeneSymbolFAM219B
Binding site1987,2038
Score0.923
Seed1
Au0.412
Energy-27.1
Binding len24
Me-10.109
Phylopstem0.9808902363636363
Phylopflank-0.028220767499999994
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure