Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTGTTTTCAAAAATTGGCATTGGCCAGGC
.((((((...((((((.(((((&.))))).)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001321983
GeneSymbolPRKAR2A
Binding site3207,3240
Score0.923
Seed1
Au0.529
Energy-18.8
Binding len20
Me-8.406
Phylopstem0.5858949333333333
Phylopflank0.3648500612500001
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure