Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCTCAGAAAGAGGCAGTGA
(((((.((.((((((((((...&))).))))))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001322006
GeneSymbolPMS2
Binding site1280,1300
Score0.923
Seed0
Au0.426
Energy-24.2
Binding len20
Me-6.895
Phylopstem-0.4469090909090909
Phylopflank-0.20199999999999999
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end5
PositionCDS
2D Structure