Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCAGATGGAGGAGGCAGTA
.((((.((((((((((((....&))))))..)))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001322008
GeneSymbolPMS2
Binding site3514,3534
Score0.846
Seed0
Au0.471
Energy-23.1
Binding len20
Me-5.694
Phylopstem0.3396636714285715
Phylopflank0.59877893
Longest consecutive pairings6
Position of longest consecutive pairings14
Pairings in 3prime end4
Position3UTR
2D Structure