Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTCTCTACCCAGCTGTAT
.((((((((.(((.(..(((.&)))..).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047427692
GeneSymbolBBOX1
Binding site327,346
Score0.846
Seed1
Au0.515
Energy-18.3
Binding len19
Me-6.126
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure