Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTTCCAGTCTTTGTATGTCAGA
..(((((((((((...(((((.&.)))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001322026
GeneSymbolGPATCH2L
Binding site2909,2932
Score0.815
Seed1
Au0.632
Energy-17.7
Binding len18
Me-6.782
Phylopstem0.3475573181818182
Phylopflank-0.03475363125
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure