Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCCCCTGAGGGGCCC
....((((((((...((((((.&))))))...)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001322026
GeneSymbolGPATCH2L
Binding site2093,2111
Score0.846
Seed0
Au0.412
Energy-24.9
Binding len18
Me-12.428
Phylopstem-0.19326437500000004
Phylopflank0.09225291000000004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure