Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGCTGTTTATTCAGTTCTGCCTTTGCCAGGG
.(((((((......(((((...&.)))))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001322027
GeneSymbolGPATCH2L
Binding site3063,3097
Score1.0
Seed1
Au0.559
Energy-17.8
Binding len17
Me-14.41
Phylopstem-0.5495433571428572
Phylopflank-0.041072431250000055
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure