Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCGGCGGCTGAGCTGCC
..((((((.(((((((..(((&)))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047427700
GeneSymbolNUDT22
Binding site28,47
Score0.923
Seed1
Au0.309
Energy-21.6
Binding len19
Me-6.013
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure