Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGGGTCCCTGCATTGTCCAGGAGGCAGG
..(((.(((((((((((((((.&))))))))))..............))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001322072
GeneSymbolZSCAN5A
Binding site1146,1180
Score0.846
Seed0
Au0.456
Energy-27.1
Binding len34
Me-6.858
Phylopstem-0.2362126896551725
Phylopflank-0.6731947087500001
Longest consecutive pairings10
Position of longest consecutive pairings24
Pairings in 3prime end7
PositionCDS
2D Structure