Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCTCTAGGCAGAGAGGAGGAGAGGTGTTGCCGGCTGGAGGGCCAACCAGTGA
(((((((((((((((((((((.&)))))......))))))))))...........................)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001322117
GeneSymbolPDPR
Binding site5338,5393
Score0.846
Seed1
Au0.382
Energy-26.8
Binding len55
Me-3.938
Phylopstem-0.110005
Phylopflank-0.40125444750000006
Longest consecutive pairings10
Position of longest consecutive pairings34
Pairings in 3prime end7
Position3UTR
2D Structure