Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTACCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((((.&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001322177
GeneSymbolPDE12
Binding site5313,5336
Score0.923
Seed1
Au0.515
Energy-28.9
Binding len23
Me-10.109
Phylopstem0.03722272727272727
Phylopflank0.012155447124999979
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure