Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACTTTGTATGCA
.....((((((((.(((((...&))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001322237
GeneSymbolRPS6KA5
Binding site3283,3298
Score0.923
Seed0
Au0.618
Energy-17.7
Binding len15
Me-14.522
Phylopstem0.0126456
Phylopflank-0.38855699374999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure