Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((...&)))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001322237
GeneSymbolRPS6KA5
Binding site12986,13007
Score0.846
Seed1
Au0.338
Energy-27.2
Binding len21
Me-10.109
Phylopstem0.04509418181818182
Phylopflank-0.023572162500000077
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure