Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((.((&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001322237
GeneSymbolRPS6KA5
Binding site13972,13995
Score0.923
Seed1
Au0.426
Energy-26.9
Binding len23
Me-10.109
Phylopstem-0.13127300000000003
Phylopflank0.09907422500000002
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure