Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((...&)))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001322237
GeneSymbolRPS6KA5
Binding site11205,11226
Score0.846
Seed1
Au0.382
Energy-26.9
Binding len21
Me-10.109
Phylopstem-0.16675236363636362
Phylopflank0.11784908750000003
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure