Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCAAGTACAGTGTGTGTCGGA
..((((((((((.((((.....&.)))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001322286
GeneSymbolZNF396
Binding site2289,2311
Score1.0
Seed1
Au0.529
Energy-17.7
Binding len17
Me-6.246
Phylopstem0.19786770000000004
Phylopflank0.23592751874999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure