Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCTGCCCTGTCCGAAATGGAGCCAGTC
.(((((((((((((((((((((&))))))))........)))).))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001322311
GeneSymbolPHACTR1
Binding site557,588
Score0.846
Seed1
Au0.412
Energy-26.8
Binding len31
Me-3.793
Phylopstem2.812679393333333
Phylopflank3.3062092187500003
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure