Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGAGGGGTTGGTGT
(((((((.(((((((((((...&)))))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001322313
GeneSymbolPHACTR1
Binding site308,327
Score1.0
Seed1
Au0.397
Energy-27.1
Binding len19
Me-6.251
Phylopstem0.0355004090909091
Phylopflank-0.2596328137500001
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure