Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGGGCCCCCAGGGAGGAGGAGTTGGAGCACCTGAACCAGGCCAGCGA
(.((((((((((((((((....&.)))))))))))......................))))).).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001322462
GeneSymbolSH3BP5L
Binding site1223,1271
Score0.846
Seed1
Au0.397
Energy-24.9
Binding len42
Me-5.101
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings30
Pairings in 3prime end4
Position5UTR
2D Structure