Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTATTTATTTTAAATCTCTCTAGGATGAGTTTAGAACTGTAGCAGTGCAGG
((((((((((((((.((((.(&.).)))).)))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047427807
GeneSymbolMTMR2
Binding site2138,2192
Score0.846
Seed1
Au0.603
Energy-20.8
Binding len25
Me-4.673
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure