Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCCAGGCTGGAGTGCGGTGG
((((((((((..(((((((.((&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001322814
GeneSymbolSOD2
Binding site4611,4634
Score1.0
Seed1
Au0.412
Energy-26.2
Binding len23
Me-10.109
Phylopstem0.1407589090909091
Phylopflank0.05266157499999993
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure