Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCCAGGCTGGAGTGCGGTGG
((((((((((..(((((((.((&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001322815
GeneSymbolSOD2
Binding site4548,4571
Score1.0
Seed1
Au0.412
Energy-26.2
Binding len23
Me-10.109
Phylopstem0.13526145454545452
Phylopflank-0.03502325000000006
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure