Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGATGAACCACAAGGCAGCTAGTC
.((((((((((((((((((...&)))))))........)))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001322818
GeneSymbolUNC5D
Binding site4385,4413
Score0.846
Seed1
Au0.544
Energy-23.7
Binding len28
Me-3.793
Phylopstem0.0981580822222222
Phylopflank0.134770656
Longest consecutive pairings7
Position of longest consecutive pairings21
Pairings in 3prime end5
Position3UTR
2D Structure