Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACTCAGGAGGCTGAGGTGGGAGGATCGCTAGAGCCCAGAGAGCCAA
...((((((((((((((((((.&)))))))))))).............................)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001322862
GeneSymbolNIPAL3
Binding site3973,4021
Score0.923
Seed0
Au0.426
Energy-23.7
Binding len48
Me-6.515
Phylopstem-0.09605654893617017
Phylopflank-0.28196918000000004
Longest consecutive pairings12
Position of longest consecutive pairings36
Pairings in 3prime end7
Position3UTR
2D Structure