Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATGTGGAACTAGGTA
((((((..(((.((((((....&)))))))))...)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001322923
GeneSymbolRCSD1
Binding site3817,3836
Score0.923
Seed0
Au0.485
Energy-16.0
Binding len19
Me-11.142
Phylopstem-0.6257165333333333
Phylopflank-0.039094428750000014
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end4
Position3UTR
2D Structure