Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGGCCCAGAGGCAGAAAATAGGTGTGGGAGCCCCAGGGAGGAAAAGCCAGCTGG
((((((((((((((((((....&.)))))))))))...))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001322923
GeneSymbolRCSD1
Binding site963,1019
Score1.0
Seed1
Au0.456
Energy-27.8
Binding len24
Me-3.938
Phylopstem-0.19446188181818183
Phylopflank-0.09658612499999997
Longest consecutive pairings11
Position of longest consecutive pairings12
Pairings in 3prime end4
PositionCDS
2D Structure