Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGATCTTGTAAATTTAAAATTGGATTAACATTGGAGTGCTGGGG
.((((((((.((((((.(((((&.))))).))))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001323031
GeneSymbolSV2B
Binding site4716,4760
Score1.0
Seed1
Au0.603
Energy-20.1
Binding len24
Me-5.036
Phylopstem0.010394733749999975
Phylopflank0.252813228125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure