Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAGTGCCGGTCATCTGTCACCAGTGACAGTGAGGGGGCCCATGTGA
(((.(((((((((((((((...&)))))))).............................)))))))...))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001323047
GeneSymbolPHTF1
Binding site1774,1825
Score0.821
Seed0
Au0.441
Energy-24.2
Binding len51
Me-6.97
Phylopstem2.3445983304545455
Phylopflank3.9178486880000007
Longest consecutive pairings8
Position of longest consecutive pairings43
Pairings in 3prime end5
PositionCDS
2D Structure