Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGGGCCAGGACCGGCCTGGGAGAACCCAGAAAGGGGCTCGAAGAGCAGATTGAGCTTCCAAGTGG
(((((((((((((((((((...&.)))))))))))))))......................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001323075
GeneSymbolLOC101059915
Binding site763,829
Score0.821
Seed1
Au0.368
Energy-29.0
Binding len43
Me-3.938
Phylopstem-0.1809712682926829
Phylopflank-0.42561476249999997
Longest consecutive pairings15
Position of longest consecutive pairings27
Pairings in 3prime end5
PositionCDS
2D Structure