Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCACATCAATGCCAGGA
.((((((((...((((.(((..&)))))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001323079
GeneSymbolHSFX3
Binding site709,727
Score0.846
Seed1
Au0.544
Energy-17.2
Binding len18
Me-11.207
Phylopstem-0.08350456249999999
Phylopflank0.7174817149999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure