Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACGTATCTATCACATCAATGCCAGGAAAGAAGCAATCAAAATGTGTCAGCAGGGAGCCCCCAGTGT
((((((((((((.((((.....&.)))).))))))))...)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001323079
GeneSymbolHSFX3
Binding site699,767
Score0.923
Seed1
Au0.426
Energy-21.2
Binding len22
Me-5.227
Phylopstem-0.043944379999999984
Phylopflank0.36201365249999995
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end3
PositionCDS
2D Structure