Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCTAGAAGTTGAGGCAGCCAGCTGT
(((((((((((((((((((...&)))))))....)))).)))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001323089
GeneSymbolJAKMIP3
Binding site3951,3977
Score0.923
Seed1
Au0.426
Energy-24.0
Binding len26
Me-3.938
Phylopstem-0.26346422399999997
Phylopflank-0.5715098225
Longest consecutive pairings7
Position of longest consecutive pairings19
Pairings in 3prime end5
Position3UTR
2D Structure